GenePage for the intK' pseudogene of Escherichia coli K-12

Primary Gene Name: intK'
EcoGene Accession Number: EG13835
K-12 Gene Accession Number: ECK1561
MG1655 Gene Identifier: b1567
Gene Name Mnemonic: Systematic nomenclature
Alternate Gene Symbols: ydfW
Description: Pseudogene, integrase fragment, Qin prophage
  # bp Upstream # bp Downstream
MW: 7155.16 ---------60 aa Pre-Run BlastP UniProt
Pre-Run BlastP NR+Env
Left End: 1647174
Left Intergenic Region

Name: flxA_intK

Length: 436 bp gap

Orientation: Convergent

Left_end: 1646738

Right_end: 1647173

Centisome: 35.48

Genomic Address
Counterclockwise
Minute or Centisome (%) = 35.49
Right End: 1647356
Right Intergenic Region

Name: intK_ydfX

Length: 1 bp gap

Orientation: Codirectional-

Left_end: 1647357

Right_end: 1647357

Centisome: 35.49

A previous 75 aa version of an intact IntK(YdfW) has been replaced with this 60 aa intK'(ydfW') C-terminal pseudogene, which contains the original 49 aa ORF version of b1567. An intact version of 437 aa IntK (hits PF00665) is found in E. coli ATCC 8739 (EcolC_2069, NCBI: 169755010).

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BamHI EcoRI HindIII